BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A06SP1|AL428312
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1042 1698 0.0
>3x_Contig1042
Length = 3616
Score = 1698 bits (856), Expect = 0.0
Identities = 866/870 (99%)
Strand = Plus / Plus
Query: 1 gtgcaggtttgttggaatcggtcgtggctgtgactccattcgaagccatcaagactgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 gtgcaggtttgttggaatcggtcgtggctgtgactccattcgaagccatcaagactgcat 1231
Query: 61 tgatcgatgataagcaagctgctgtgccaaaatatcaaaataacgggaaaggtatggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 tgatcgatgataagcaagctgctgtgccaaaatatcaaaataacgggaaaggtatggtga 1291
Query: 121 gcaattatgctaagcttttatccgatcaaggattttctggtctttatagaggtgtcttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 gcaattatgctaagcttttatccgatcaaggattttctggtctttatagaggtgtcttac 1351
Query: 181 cagtttccatgagacaagctgcaaatcaagccgttagattgggttgttataacaagatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 cagtttccatgagacaagctgcaaatcaagccgttagattgggttgttataacaagatca 1411
Query: 241 agactttggtgcaagattacacaaacgtacctaaggataaacctttgagttcaggtttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 agactttggtgcaagattacacaaacgtacctaaggataaacctttgagttcaggtttga 1471
Query: 301 ccttcattgtaggtgccttcagtggtatcgttaccgtttatacgacaatgcctatcgata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1472 ccttcattgtaggtgccttcagtggtatcgttaccgtttatacgacaatgcctatcgata 1531
Query: 361 ccgttaagacaagaatgcaatctttgaatgcaggccaatattcttctactattaactgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1532 ccgttaagacaagaatgcaatctttgaatgcaggccaatattcttctactattaactgtt 1591
Query: 421 tcgctaccattttcaaggaggaaggtttgaagactttctggaaaggtgctactccaagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1592 tcgctaccattttcaaggaggaaggtttgaagactttctggaaaggtgctactccaagat 1651
Query: 481 tgggtagattgatcctttctggtggtattgtcttcaccatctatgagaaggtattgacgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1652 tgggtagattgatcctttctggtggtattgtcttcaccatctatgagaaggtattgacgg 1711
Query: 541 ttttggcataattagcctttcagctttcttagtgtgtaacaaacgtgtagtttacttata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1712 ttttggcataattagcctttcagctttcttagtgtgtaacaaacgtgtagtttacttata 1771
Query: 601 aaacaaaaaatactaaacgataatcttaatccgcatcataaagatgatcggccatttgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1772 aaacaaaaaatactaaacgataatcttaatccgcatcataaagatgatcggccatttgat 1831
Query: 661 gagaatcttttccatctatattgttatgatatacaaaaaaatataatacacatgtttgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1832 gagaatcttttccatctatattgttatgatatacaaaaaaatataatacacatgtttgca 1891
Query: 721 tatatccacatgagagacatcaaacatgccgaatagcatcaggtaaaaggaaccattgta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1892 tatatccacatgagagacatcaaacatgccgaatagcatcaggtaaaaggaaccattgta 1951
Query: 781 tcatgaaatagattaamagagtaatttggtcatagggtgcactgaattaagagaagacaa 840
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1952 tcatgaaatagattaacagagtaatttggtcatagggtgtactgaattaagagaagacaa 2011
Query: 841 aaatttcctttttgttagtttctgaagagg 870
||||||||||||||||| |||||| |||||
Sbjct: 2012 aaatttcctttttgttattttctgtagagg 2041
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7082
Number of Sequences: 1807
Number of extensions: 7082
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)